Insertion junction: CLIP2.049673_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049673
Chromosome:chromosome 4
Location:1516027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213650 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCACCTGAGGGCTGCGCTCGCCGCCCAGCGCCACGAACGAGCTTGTGA
Internal bar code:GGATAGCACGAATGCTGACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1108
LEAP-Seq percent confirming:42.1053
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCAAGCCCATACGTT
Suggested primer 2:TTGCTCATGACCCCAACGAA