Insertion junction: CLIP2.049674_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049674
Chromosome:chromosome 7
Location:1299584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322300 XPD4,RAD3D RAD3/XP-D family DNA-binding helicase; (1 of 1) K11273 - chromosome transmission fidelity protein 1 [EC:3.6.4.13] (DDX11, CHL1, CTF1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGGCACTGGCTGTAGCAGCGGCGCCGCCAACGCCTGTGGCGGTGGC
Internal bar code:ACAGTAATGAAGAAAACGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTACTGACCGGGCACAC
Suggested primer 2:TCAAGGAAGGGAGGAGGAGG