Insertion junction: CLIP2.049679_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049679
Chromosome:chromosome 17
Location:2401331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714400 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTAGGTGGCGGCGCCCACTGCGTAAGCAGTCCAGGCCGCCGGCCAG
Internal bar code:AAGGTGTGGTGCAGATTAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2146
LEAP-Seq percent confirming:90.1639
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCTTCCTGCAGGTGTG
Suggested primer 2:CGAGCGCAAGAAGAAATCGG