Insertion junction: CLIP2.049683_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049683
Chromosome:chromosome 3
Location:6466714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193500 TGL8,CGLD15,PGD1,PML1 (1 of 2) PTHR21493//PTHR21493:SF124 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED; Plastid galactoglycerolipid degredation 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTACGGCAAACCCTCACAAGCGGTACTCGCGCCGCCTCCACAACAGG
Internal bar code:GCTCCACCCGTAAGAACTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1471
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCTGATGAGTTGAAGCC
Suggested primer 2:GAGAGCTTTTACGCTGGGCT