Insertion junction: CLIP2.049687_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049687
Chromosome:chromosome 2
Location:4181639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104100 (1 of 1) PTHR10209//PTHR10209:SF216 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTAGTAGACGACCCGCTGCGGCCGGGACCCACCGACTCACTGCGCCC
Internal bar code:TATGGGCGCCTCGGGCTTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1500
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACGGCAATTCTAAAGCG
Suggested primer 2:GCTTTCTCCCTTACCACCCC