Insertion junction: CLIP2.049688_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049688
Chromosome:chromosome 9
Location:2307649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGTTTGATAGCGGTGTGGCACAGAAGATACTGCTGGCAGGCATGGCA
Internal bar code:AGTTGGTCTACTCGTGTTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:317
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTACAGCCCCAGCAGTG
Suggested primer 2:TGTCTAAGCGCGGTTTCCTT