Insertion junction: CLIP2.049701_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049701
Chromosome:chromosome 10
Location:5514328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458050 BCA3 Branched chain amino acid aminotransferase; (1 of 1) 2.6.1.21//2.6.1.42 - D-amino-acid transaminase / D-aspartic aminotransferase // Branched-chain-amino-acid transaminase / Transaminase B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACACCACCATCGGCAAGCCCACCATCGTAATCGTGCCCGAGTACAA
Internal bar code:TTCGCTAAAACAACAAGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1985
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTTGCGCACGATGAAG
Suggested primer 2:CATGCCTGGCTCTGAGTTGA