Insertion junction: CLIP2.049708_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049708
Chromosome:chromosome 12
Location:2526684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507002 (1 of 38) IPR017448 - SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTGGTCCTGCGACTCGTTGGCGTGCAGCCTCGACCCTGCCCCATTTA
Internal bar code:GCCAATCCACTGACTCTAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:523
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGCAGGAGCAGGAATAG
Suggested primer 2:GTAGGGCGGTCAGAGTCAAG