Insertion junction: CLIP2.049715_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049715
Chromosome:chromosome 7
Location:1526005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324400 VPS24 Subunit of the ESCRT-III complex; (1 of 1) K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCTCTGACCTGCCACATGCGGCCTCGCACCTGGCCCCACAGCGTGCC
Internal bar code:TCATACCATTCATGGGCCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2085
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCATACGCCAACGGTCAA
Suggested primer 2:GAACACGATCATCAAGGCGC