Insertion junction: CLIP2.049716_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049716
Chromosome:chromosome 17
Location:2545357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715900 Similar to Dihydrofolate Reductase-Thymidylate; (1 of 1) 1.5.1.3 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTCTGGGAGTCTGGGGTCTCGGTTCCGGCAACCGTCAGGCGGAACC
Internal bar code:CGTTGTTGGTCCCAGGAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAACCACAGCAGCTCCTC
Suggested primer 2:CGAACCAGTCACCGAGAACA