Insertion junction: CLIP2.049716_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049716
Chromosome:chromosome 17
Location:2545401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715900 Similar to Dihydrofolate Reductase-Thymidylate; (1 of 1) 1.5.1.3 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCCTCTTGCACAGCTGTTGCATCGGCCGTTGCCACGTCGTACCCTA
Internal bar code:GTTGGGAAGGTCTCCTCCCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:779
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACCAGTCACCGAGAACA
Suggested primer 2:ATGAACCACAGCAGCTCCTC