Insertion junction: CLIP2.049732_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049732
Chromosome:chromosome 16
Location:1077300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649466 CAX5 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGGGGTGGTTGGGGTGGGGCGCATGGCACGGGCACATGGGGGTGGGG
Internal bar code:GTGGGGGTGATTGTACAAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGGCAATACCCCGTCTT
Suggested primer 2:GGAAAGCACGAAGGGAGGAA