Insertion junction: CLIP2.049736_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049736
Chromosome:chromosome 13
Location:1355521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571520 ANK12 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTAGCGCCTGCGCGGCGTCCACCCAGCCCTCACGCGCGGCCACGTGCA
Internal bar code:TTTTTAGAGGGCGCTGAAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1721
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCAACACACTTGGGCAA
Suggested primer 2:CACTAAATGAGAAGCGGCGC