Insertion junction: CLIP2.049737_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049737
Chromosome:chromosome 15
Location:902600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640100 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACAGATCCGCCGGGTTGCCGCGAATGTTGTAGCGATACCAAAACGAC
Internal bar code:CTTGTGTGTCGAGCGTGAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2732
LEAP-Seq percent confirming:80.2083
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTCGTTTGCAGAACCTA
Suggested primer 2:ACACACAGCTGACTCACTCG