Insertion junction: CLIP2.049737_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049737
Chromosome:chromosome 15
Location:902607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640100 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGCGGCCGCCGGGCGGCGCCGCGGCCTGGGCTCGCCGGGAATTGAA
Internal bar code:GAGGTAAGGGTTTCCTATCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1984
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACAGCTGACTCACTCG
Suggested primer 2:AGCGTCGTTTGCAGAACCTA