Insertion junction: CLIP2.049743_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049743
Chromosome:chromosome 16
Location:1340810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651801 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCGACAAGGCCGTCAGCAAGACCCTCGCTGACGTGGCGGGGCTGCTG
Internal bar code:GACAGTTGTGTTCCCGGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGTACTCACTAGGCGG
Suggested primer 2:GAAGTAATGCTGCGCCCATG