Insertion junction: CLIP2.049766_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049766
Chromosome:chromosome 12
Location:9116542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544000 RSP5 (1 of 4) 1.1.1.65 - Pyridoxine 4-dehydrogenase / Pyridoxine dehydrogenase; Radial Spoke Protein 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGCCGCGGCCGACCCGCTGCCGGTCCTCAAGGCGCTGCAGAGGATGG
Internal bar code:CCGGCAGATGTCATAGCTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:47
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGCAGTAGGAAGGAGGG
Suggested primer 2:GGGATGACCACGTTTGAGGT