Insertion junction: CLIP2.049768_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049768
Chromosome:chromosome 8
Location:3543194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379300 (1 of 1) PTHR12459//PTHR12459:SF6 - UNCHARACTERIZED // TRANSMEMBRANE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGACGTTTGGTGGGAGCAGGGGCAGGGGCAGGGGCCGAGGTGGTAA
Internal bar code:TATGCGCGGCGATGATACTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:704
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGTGAGAGGGGGATTAC
Suggested primer 2:CACTGCACAATGTCACTGCC