Insertion junction: CLIP2.049772_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049772
Chromosome:chromosome 4
Location:2562822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222600 PHC46 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTCCTCAGATGTGTTGCCGCAGCTCCAGCCCTACCTAAACCTCGTTC
Internal bar code:CCAATGACGCGTGTAAGAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1269
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTGCCTTGACCAAACG
Suggested primer 2:AGCTGTGCTTTACGCTGAGT