Insertion junction: CLIP2.049788_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049788
Chromosome:chromosome 16
Location:5701008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680900 RPB1 (1 of 1) K03006 - DNA-directed RNA polymerase II subunit RPB1 (RPB1, POLR2A); DNA-directed RNA polymerase II, largest subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCAGGACAACTTCATGAACTGCGTGATGGGCATCGAGGACTGGGACG
Internal bar code:GTAAGCAAGATAATGCTTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1440
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAATGCCGATGCTCATG
Suggested primer 2:GCGACGAGATGAACATGCAC