Insertion junction: CLIP2.049789_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049789
Chromosome:chromosome 3
Location:3150323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164850 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTGGCTGTTTTCCAGAGCCCTACAGCAGCCAAGCGCATGATGTTCCA
Internal bar code:GCTTAGTCGGCTGCGGCTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1406
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGGGGAGATTACTGGG
Suggested primer 2:GTGTCAAGGCGGAGGAAGAA