Insertion junction: CLIP2.049801_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049801
Chromosome:chromosome 9
Location:2441526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393450 FAS10,FAP233,FLA5 Flagellar Associated Protein 233; (1 of 21) PF02469 - Fasciclin domain (Fasciclin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTTATTGGGGGTGCACAGCCGCTCCTAACCTTTACGTCGTATGTCG
Internal bar code:TTAAGAGCGCTGGAGCAACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:19.1489
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCCGCAATGTGTTTAC
Suggested primer 2:GAGGTTCTGCACTGTCGTCA