Insertion junction: CLIP2.049804_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049804
Chromosome:chromosome 3
Location:4532330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800334 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTTTCCAGTGCCTGCCGGTGCGCGGTCGACATCCGCGATCAAGGTTT
Internal bar code:AGAATGATATACTAATGTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1059
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTGACGAGAGGACGATG
Suggested primer 2:AGTACTGCTTCAACGTGGGG