Insertion junction: CLIP2.049817_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049817
Chromosome:chromosome 16
Location:690239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691400 (1 of 102) PF01753 - MYND finger (zf-MYND) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCGCTAGCAGGGCCGCCAGCAGCGCCAGCAGCGCTAGCAGCAGCAT
Internal bar code:ATATTCCAGTTCTCGGCCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5134
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCATGTTCTGGGTCTGCA
Suggested primer 2:AGGAAGCGTGCGTATACTCG