Insertion junction: CLIP2.049820_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049820
Chromosome:chromosome 1
Location:4913183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034150 (1 of 1) PTHR10110//PTHR10110:SF86 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 7-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCTGGTGCAGCGGCTGGGGGAGGGTGGCGTCGGCGCGATAGAGGCG
Internal bar code:TAAGTGCATTGCTCACTACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:73.913
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGAGGGATCCTGTCTGT
Suggested primer 2:CAGTCCGACATCCAGCTGAC