Insertion junction: CLIP2.049832_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049832
Chromosome:chromosome 9
Location:5873951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCGCTGAGGAAGGCGCCGCGGGCGTGCGGCAGGGACATGTGGCTCG
Internal bar code:ATAATAGGCAACGTTCTGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGGGGACTTGGAAGACG
Suggested primer 2:TCAGGCACCTCCTCCTACTC