Insertion junction: CLIP2.049832_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049832
Chromosome:chromosome 9
Location:5873954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCCGGTGCCGCGCCAGCAGCAGCCCCAGCGGCACCAGCAGCACCCA
Internal bar code:GTTATGCCCGTAAGACTTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2292
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGCACCTCCTCCTACTC
Suggested primer 2:GACAGGGGACTTGGAAGACG