Insertion junction: CLIP2.049835_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049835
Chromosome:chromosome 6
Location:4656845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278451 PDK2 Pyruvate dehydrogenase kinase; (1 of 2) 2.7.11.2 - [Pyruvate dehydrogenase (acetyl-transferring)] kinase / Pyruvate dehydrogenase kinase (phosphorylating) 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGCGTGAGGCACCAGTGCTGGCCCAGCTAGCATCATGCCTTAGCTT
Internal bar code:CTGAGATTGTGATAGTAGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1089
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGCTACGGGTAGAATGC
Suggested primer 2:TCGTCTCCATTGCAACGTCA