Insertion junction: CLIP2.049838_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049838
Chromosome:chromosome 6
Location:8123536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305650 PAO6,Tic55-like4,TIC55-4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGAGAACGGAGTGATCGCATGACACGGGGGGGGGGCGCATGGGCGAT
Internal bar code:ACTGTGTGTAGCAACGTCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1539
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCACGGTTTGTTAGGCT
Suggested primer 2:GAACGTTGCGCAAAGACAGT