Insertion junction: CLIP2.049839_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049839
Chromosome:chromosome 12
Location:9483466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540650 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGTCGGGTAGCCGAGGGAAGCGACGCCCTGTGACACGTGCTGACACC
Internal bar code:GTAACTCGACCGGCTAGAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGCAGGGCTTGTGAG
Suggested primer 2:CACACAAGCACTGACACACG