Insertion junction: CLIP2.049839_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049839
Chromosome:chromosome 12
Location:9483468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540650 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACCCCCTCCCCGCTGCAACCTCCCGGCTTCACCCTCCACCCTACACG
Internal bar code:GTAACTCGACCGGCTAGAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:32.5
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAAGCACTGACACACG
Suggested primer 2:GTGTTTGCAGGGCTTGTGAG