Insertion junction: CLIP2.049841_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049841
Chromosome:chromosome 6
Location:6083590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290900 (1 of 1) PF06294//PF11971 - CH-like domain in sperm protein (CH_2) // CAMSAP CH domain (CAMSAP_CH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTGTTTCACTGCAGCTCTGCTAACGGCCTGCAACAAAAGATGTACAA
Internal bar code:AGACTATGGTTTATTGCGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1806
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TCTAACACCCAACACGTCGG
Suggested primer 2:GGTTCTGTCTGTGTGCGGTA