Insertion junction: CLIP2.049849_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049849
Chromosome:chromosome 2
Location:4235999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104400 (1 of 1) IPR000104//IPR005033 - Antifreeze protein, type I // YEATS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACAAGGCCAAGCAACACCACTGCTGACTGTGCAACTGCCTACACGCG
Internal bar code:GGAAGTAAGGTAGCCGGATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2846
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATCCCTGACACCATCGC
Suggested primer 2:ATTCGGCACCTTGGGTACTG