Insertion junction: CLIP2.049850_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049850
Chromosome:chromosome 12
Location:1486865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488000 FFT4 putative fructan fructosyltransferase; (1 of 2) 2.4.1.99 - Sucrose:sucrose fructosyltransferase / Sucrose:sucrose 1-fructosyltransferase outside_mRNA
Cre12.g488050 FFT5 putative fructan fructosyltransferase; (1 of 1) 2.4.1.99//3.2.1.26 - Sucrose:sucrose fructosyltransferase / Sucrose:sucrose 1-fructosyltransferase // Beta-fructofuranosidase / Saccharase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTTCCCGCGCAAGAATGCGGCCTCCACAAGTTCAGGACCTCAGGCCG
Internal bar code:CAAATATACACGGGATATTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5207
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAGGCCCGTTAGGATCT
Suggested primer 2:CGTCAAAAACCTGCTGCGAA