Insertion junction: CLIP2.049854_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049854
Chromosome:chromosome 1
Location:3623886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023600 (1 of 8) PTHR10366:SF411 - HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCCACGTTCATGCCCCCCGTGCATGCATGCACGACGTCCATGCGTG
Internal bar code:CATCCTCTAACTAGTCTGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2536
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCACTGATGCATGTCAC
Suggested primer 2:CGTTCATCAATCACGCCGTC