Insertion junction: CLIP2.049856_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049856
Chromosome:chromosome 10
Location:5976875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801197 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGCAGGGTTGCGGAGACGTGGTGGACAGGAGGCCCTGCTTGTCAAC
Internal bar code:GCCTCCTCCAGTCATATCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2939
LEAP-Seq percent confirming:44.7368
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCACAAACTCCGCATCT
Suggested primer 2:CCCTCAGCGTCCACAGATTT