Insertion junction: CLIP2.049857_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049857
Chromosome:chromosome 17
Location:6770088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746647 PUF2 (1 of 1) PTHR12537:SF12 - MATERNAL PROTEIN PUMILIO; Puf protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGGAACAGTAGGGGCCAGGTACTTGTAAAAGTAACATACAAGCGTTC
Internal bar code:ATCACGGTGAATCACTCATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:808
LEAP-Seq percent confirming:42.1053
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCGCCGAGATGAGTGAG
Suggested primer 2:CTCGGCTGTTCTGAGCTTGA