Insertion junction: CLIP2.049860_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049860
Chromosome:chromosome 12
Location:9792934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549002 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGGCCGCTGTTGGAGGACAGCAGCACGTGCGCCTGCAGCAGCAGCAG
Internal bar code:CCATCGCCCAGGGAATACTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GACACGGTGAGAAGGGAAGG
Suggested primer 2:GGGCCTGAAGGATACGAGTG