Insertion junction: CLIP2.049862_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049862
Chromosome:chromosome 3
Location:2407417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158550 SRH4 (1 of 1) K14437 - chromodomain-helicase-DNA-binding protein 7 [EC:3.6.4.12] (CHD7); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGTCCGAGTCTGAGGAGTCGTTGGCGTAGCGCTTCTTGAGCGCGGCG
Internal bar code:AAGCATGGACTGGTGTGTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:690
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATCGAAGGGCGTTTGCA
Suggested primer 2:CTCGAGTCTCAAGACCGCTC