Insertion junction: CLIP2.049864_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049864
Chromosome:chromosome 3
Location:3672947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre50.g761447 (1 of 1) K03500 - 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] (rsmB, sun) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGCTGTGTGGGTTTCAAGAGGACAAACGCCTCAAGAGTGCTGGGCT
Internal bar code:TAGTTGACCCGTTATAGCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAACAGCATCGTGCCAA
Suggested primer 2:TCCAATTACGTCGACGCCAA