Insertion junction: CLIP2.049866_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049866
Chromosome:chromosome 5
Location:3161826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232002 ACX2 Acyl-CoA oxidase/dehydrogenase; (1 of 2) PTHR10909//PTHR10909:SF317 - ELECTRON TRANSPORT OXIDOREDUCTASE // ACYL-COENZYME A OXIDASE 2, PEROXISOMAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATATGTGTGTGTGTGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGC
Internal bar code:GATTCTCCAGTTGTGTTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1301
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCTCCGTGTGTGTGTGT
Suggested primer 2:GCACTGCCTCCCTCTCATTT