Insertion junction: CLIP2.049874_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049874
Chromosome:chromosome 5
Location:3181081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232050 (1 of 37) IPR008979 - Galactose-binding domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGTACCGTATGTGCAAACGCACACACAACCGTGGCGGCACATTCTG
Internal bar code:TGTGGGCCTCCATCATCGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGCAGCAAACCTGTTC
Suggested primer 2:AGAACGAACACCCTGCTCTG