Insertion junction: CLIP2.049876_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049876
Chromosome:chromosome 7
Location:1450076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323650 (1 of 1) PTHR13109//PTHR13109:SF7 - NEUROCHONDRIN // NEUROCHONDRIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGGCGGGGAGGGTGGTGTGCCGGAGGGCGTGCGGGCCGGATGGCTG
Internal bar code:GCGAAAGCGGTTAAGGCTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1303
LEAP-Seq percent confirming:43.3333
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTGTTGCGATGTTCAA
Suggested primer 2:GCAGGTTTGTGCAAGAGTGG