Insertion junction: CLIP2.049888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049888
Chromosome:chromosome 4
Location:3726600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229250 (1 of 1) PTHR10209//PTHR10209:SF100 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCGTTCGCCGCCTCACCCACACCTCATGCTCGATGACTCCCAGTTTT
Internal bar code:TACTGGATATTGGTGCTCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:904
LEAP-Seq percent confirming:68.5714
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGCGACCTAACCGATT
Suggested primer 2:GTCCTTTCCAGCTCCAGGAC