Insertion junction: CLIP2.049892_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049892
Chromosome:chromosome 16
Location:114926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695400 (1 of 2) PF09733 - VEFS-Box of polycomb protein (VEFS-Box) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACAGCCCTTGGAGGCCGTTACGACCGCAATACGGTTACGGCCAGGGGA
Internal bar code:CTGCCGTTGTTCACGTGTGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:634
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AACGAGTGGATGCTGGACAG
Suggested primer 2:GGGAAGAGGAGGGTTGTGTG