Insertion junction: CLIP2.049893_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049893
Chromosome:chromosome 12
Location:4266454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518350 CYG18 (1 of 2) IPR001054//IPR029016//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // GAF domain-like // Nucleotide cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGCACACGGGCAAGGCTTACCAAACACCAAGTCGCGCGGCATGAAGT
Internal bar code:TCTTATACTACGACACCTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGGTAACTAGCAGCTCG
Suggested primer 2:GAGCTCAACCCTTGTCCCTC