Insertion junction: CLIP2.049893_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049893
Chromosome:chromosome 12
Location:4266454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518350 CYG18 (1 of 2) IPR001054//IPR029016//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // GAF domain-like // Nucleotide cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCTGCACGGGGTGCATCATGCGCCCGCTTGCCTGCACCCAGGCCTG
Internal bar code:TCTTATACTACGACACCTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:616
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTCAACCCTTGTCCCTC
Suggested primer 2:CTGGGGTAACTAGCAGCTCG