Insertion junction: CLIP2.049898_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049898
Chromosome:chromosome 1
Location:3704698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024100 (1 of 19) IPR018392 - LysM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGTGTGTGTGGCCAGTGCCCACCTACCTGTTTGACCAGGTCTTTACA
Internal bar code:TAGGGAACCTGCTCGACGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1864
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCATATCTCACCTGCCTCCC
Suggested primer 2:TGGTGGTCGCAGTAGTTGAC