Insertion junction: CLIP2.049899_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049899
Chromosome:chromosome 16
Location:6088428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677550 CYA15 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1); Solute-binding protein-like adenylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCAATGCGCCAGGCCCCGCGTAGAACTGCGCCGGCATGAGTGTATT
Internal bar code:GGTGCTTAGTTCAGTAACTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3348
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTACATGATCGACCCC
Suggested primer 2:AGTTGTGATGGCGAGGTGAG