Insertion junction: CLIP2.049900_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049900
Chromosome:chromosome 9
Location:6576523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGATTGCACCCCGGCCAGTCCGGGGTCCGGGGAGCACACGCGCAATGG
Internal bar code:GACGTTAGATCTGGACCGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5533
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAATCTGAGGCACGAC
Suggested primer 2:CCACCGTTCCTGCAACTTTG